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Introduction to organic chemistry

Learning Objectives

9 objectives

By the end of this note, you should be able to:

  • Distinguish between the terms hazard and risk for organic substances.
  • Explain why risk assessments are needed for hazardous organic materials.
  • Suggest practical methods to reduce risk in organic procedures.
  • Define homologous series and functional group with general features.
  • Apply IUPAC nomenclature to compounds containing up to ten carbons.
  • Draw organic compounds using structural, displayed and skeletal formulae.
  • Classify reactions as addition, substitution, oxidation, reduction or polymerisation.
  • Distinguish homolytic from heterolytic bond breaking by electron movement.
  • Define free radical and electrophile in terms of electronic behaviour.

Hazard, Risk and Risk Assessment

A hazard describes the intrinsic potential of a substance to cause harm, whereas risk describes the chance of that harm actually occurring during use.

Risk depends on hazard, quantity, exposure conditions and procedure. A highly flammable solvent used in a fume cupboard at small scale carries lower risk than the same solvent used in a large open beaker near a flame.

Risk assessments are essential because organic compounds are frequently flammable, toxic, irritant, corrosive, carcinogenic or harmful to the environment. The assessment identifies hazards, evaluates likelihood of harm, and specifies controls.

GHS pictogram Hazard meaning Typical organic example
Flame Flammable ethanol, hexane, propanone
Skull and crossbones Acute toxicity methanol
Corrosion Corrosive concentrated ethanoic acid
Exclamation mark Irritant or harmful many halogenoalkanes
Health hazard Carcinogen, mutagen benzene
Flame over circle Oxidising concentrated nitric acid
Environment Aquatic toxicity chlorinated solvents

Three exam-recognised methods reduce risk:

  • Working on a smaller scale, lowering the quantity of hazardous material.
  • Taking precautions specific to the hazard, such as fume cupboards for volatile or toxic vapours, gloves and goggles for corrosives, and removing ignition sources for flammables.
  • Using an alternative method or substance with lower hazard, such as heating under reflux instead of an open flame, or replacing a toxic reagent.
MisconceptionHazard and risk are not the same. A substance keeps its hazard regardless of how it is used, but the risk changes with quantity, conditions, and precautions taken.
Exam TipState both the hazard property and the conditions affecting risk in your answer.
Eight GHS hazard pictograms labelled flammable, acute toxicity, corrosive, irritant, health hazard, oxidising and environmental hazard.
Three risk-reduction methods illustrated: working at reduced scale, using a fume cupboard, and replacing naked flames with electric heating.

Homologous Series and Functional Groups

A homologous series is a family of organic compounds sharing the same general formula and functional group, with successive members differing by a –CH₂– unit.

Members of a homologous series share the same chemical reactions because the functional group dictates reactivity. Physical properties such as boiling point change gradually with chain length.

A functional group is the atom or group of atoms responsible for the characteristic chemical behaviour of a molecule.

Functional group Suffix or prefix Condensed example General formula of series
Alkane (C–C) -ane CH₃CH₃ CₙH₂ₙ₊₂
Alkene (C=C) -ene CH₂=CH₂ CₙH₂ₙ
Halogenoalkane (C–X) halo- prefix CH₃Cl CₙH₂ₙ₊₁X
Alcohol (–OH) -ol CH₃CH₂OH CₙH₂ₙ₊₁OH
Aldehyde (–CHO) -al CH₃CHO CₙH₂ₙO
Ketone (>C=O) -one CH₃COCH₃ CₙH₂ₙO
Carboxylic acid (–COOH) -oic acid CH₃COOH CₙH₂ₙO₂
Ester (–COO–) -oate CH₃COOCH₃
Amine (–NH₂) -amine CH₃NH₂ CₙH₂ₙ₊₁NH₂
Nitrile (–CN) -nitrile CH₃CN
Displayed formulae of the first four alkanes (methane to butane) with the added CH2 increment highlighted, illustrating a homologous series.
Bond diagrams of eight common functional groups with suffixes: alkene, halogenoalkane, alcohol, aldehyde, ketone, carboxylic acid, ester and amine.

IUPAC Nomenclature and Drawing Formulae

IUPAC nomenclature assigns systematic names using prefixes for chain length and suffixes for the principal functional group, ensuring every organic compound has a unique identifier.

The stem prefix indicates the number of carbons in the longest chain.

Carbons 1 2 3 4 5 6 7 8 9 10
Stem meth eth prop but pent hex hept oct non dec

Naming proceeds by these steps:

  • Identify the longest carbon chain containing the principal functional group; this becomes the parent name.
  • Number the chain to give the principal functional group the lowest possible locant.
  • Identify side groups (alkyl branches such as methyl, ethyl; halogens as fluoro, chloro, bromo, iodo).
  • Where there is a choice, number to give the lowest set of locants to all substituents.
  • Cite substituents alphabetically with their locants, using multiplying prefixes (di, tri, tetra) for repeats.
  • Separate numbers with commas, and numbers from letters with hyphens.

Three formula representations are examinable.

Formula type What it shows Example for butane
Structural Atom arrangement in a condensed line CH₃CH₂CH₂CH₃
Displayed Every atom and every bond drawn explicitly drawn formula with all C–H and C–C bonds visible
Skeletal Lines for C–C bonds; C and H on C not shown zigzag line of three segments

In a skeletal formula, each vertex and line-end represents a carbon atom, and hydrogen atoms attached to carbon are not drawn. Heteroatoms (O, N, halogens) and their attached hydrogens are always shown.

Examiner InsightNumbering choice is a frequent mark loss point. Compare both numbering directions and pick the set giving the lowest locants overall for the principal group, then substituents.
Exam TipWrite the locant set both ways and choose the lower one before naming.
Three formula representations of butane C4H10: condensed structural, fully displayed with all bonds, and simplified zigzag skeletal formula.
Skeletal formula of 2,3-dimethylbutane with the four-carbon chain numbered and two methyl branches, showing IUPAC lowest-locant naming.

Classifying Organic Reactions

Organic reactions are classified into five main types based on the change in connectivity or oxidation state of the carbon framework: addition, substitution, oxidation, reduction and polymerisation.

Reaction type Definition Example
Addition Two reactant molecules combine to form one product, often by breaking a multiple bond CH₂=CH₂ + Br₂ → CH₂BrCH₂Br
Substitution One atom or group is replaced by another atom or group CH₄ + Cl₂ → CH₃Cl + HCl
Oxidation Gain of oxygen, loss of hydrogen, or increase in oxidation number CH₃CH₂OH → CH₃CHO (with [O])
Reduction Loss of oxygen, gain of hydrogen, or decrease in oxidation number CH₃CHO → CH₃CH₂OH (with [H])
Polymerisation Many small monomer molecules join to form a long-chain polymer n CH₂=CH₂ → (–CH₂–CH₂–)ₙ

The symbols [O] and [H] denote a generic oxidising or reducing agent in organic equations where the exact reagent is not specified.

Five key organic reaction types with example equations: addition, substitution, oxidation, reduction and polymerisation of ethene.
Comparison of addition (ethene plus bromine opening the C=C to one product) versus substitution (methane and chlorine swapping an H, releasing HCl).

Homolytic and Heterolytic Bond Breaking

Covalent bond breaking is classified as either homolytic fission, which produces neutral radicals, or heterolytic fission, which produces ions, depending on how the shared electron pair is distributed.

Feature Homolytic fission Heterolytic fission
Electron split Each atom takes one electron Both electrons go to one atom
Products Two free radicals (neutral) A cation and an anion
Curly arrow Half-arrow / fish-hook (single-headed) Full curly arrow (double-headed)
Typical example Cl₂ → 2Cl• (UV light) H–Br → H⁺ + Br⁻ (in solution)
Conditions favoured Non-polar bonds, gas phase, UV Polar bonds, polar solvent

A half-headed curly arrow (fish-hook) shows the movement of a single electron in homolytic fission. A full-headed curly arrow shows the movement of an electron pair in heterolytic fission.

Examiner InsightCurly arrow type is examined strictly. Half-arrows are used only for radical processes, full arrows only for ionic mechanisms. Mixing them up loses the mechanism mark.
Exam TipCheck every curly arrow you draw matches the type of fission required.
Homolytic fission of Cl2 giving two chlorine radicals with fish-hook half-arrows, versus heterolytic fission of H-Br giving H+ and Br- ions with a full arrow.

Free Radicals and Electrophiles

A free radical is a species with an unpaired electron, whereas an electrophile is an electron-pair acceptor that is attracted to regions of high electron density.

A free radical is highly reactive because the unpaired electron seeks to pair with another electron. Free radicals form by homolytic fission and are typically uncharged.

An electrophile is electron-deficient. Electrophiles include positively charged ions and neutral molecules with a δ⁺ atom that can accept a lone pair.

Term Definition Examples
Free radical Species with an unpaired electron Cl•, CH₃•, •OH
Electrophile Electron-pair acceptor; attracted to electron-rich regions H⁺, NO₂⁺, Br⁺, the δ⁺ carbon in HBr
Free radical and electrophile diagram: a chlorine atom with an unpaired electron, a polar H-Br electrophile attacking a pi bond, and NO2+ with a positive charge.
Electrophile attacking electron density: a Br+ electron-pair acceptor with a curly arrow showing electron movement from the high-density pi bond of ethene.

QUICK RECAP

Key Points

  • Hazard is intrinsic; risk depends on use, quantity and precautions.
  • Risk assessments identify hazards and specify controls before practical work.
  • Reduce risk by smaller scale, hazard-specific precautions, or safer alternatives.
  • Homologous series share general formula, functional group, and –CH₂– increment.
  • Functional group dictates the chemical reactions of the molecule.
  • IUPAC stems run meth, eth, prop, but, pent, hex, hept, oct, non, dec.
  • Number the chain to give the principal functional group the lowest locant.
  • Substituents are listed alphabetically using locants and multiplying prefixes.
  • Structural shows arrangement; displayed shows all bonds; skeletal shows lines only.
  • Five reaction types: addition, substitution, oxidation, reduction, polymerisation.
  • Homolytic fission: each atom takes one electron, forming radicals.
  • Heterolytic fission: one atom takes both electrons, forming ions.
  • Half-headed curly arrows for radicals; full curly arrows for ionic mechanisms.
  • A free radical has an unpaired electron and is highly reactive.
  • An electrophile is an electron-pair acceptor attracted to electron-rich sites.

CAN I…? PROGRESS CHECK

Self-Assessment

  • Can I distinguish hazard from risk using a worked example?
  • Can I list three exam-recognised methods to reduce risk in organic procedures?
  • Can I define homologous series and list four characteristic features?
  • Can I recognise and name the major functional groups by suffix or prefix?
  • Can I apply IUPAC rules to name and draw compounds up to C₁₀?
  • Can I convert confidently between structural, displayed and skeletal formulae?
  • Can I classify a given reaction as addition, substitution, oxidation, reduction or polymerisation?
  • Can I describe homolytic and heterolytic fission with the correct curly-arrow type?
  • Can I define free radical and electrophile and give an example of each?
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